高性能多尺度生物与材料计算平台

GraphPPIS

Specify the query protein

Specify the PDB ID and chain of the protein (default)

or Upload PDB file (.pdb only) & specify the chain

Choose running mode

Fast mode (BLOSUM62+DSSP)

Slow mode (PSSM+HMM+DSSP)

Datasets

The datasets used in this study (Train_335, Test_60, Test_315 and UBtest_31) can be downloaded at this link.

Reference

Qianmu Yuan, Jianwen Chen, Huiying Zhao, Yaoqi Zhou, Yuedong Yang, Structure-aware protein–protein interaction site prediction using deep graph convolutional network, Bioinformatics, 2021, btab643.