J Qiu#, J Xie#, S Su, Y Gao, H Meng, Y Yang, K Liao. Selective functionalization of hindered meta-C–H bond of o-alkylaryl ketones promoted by automation and deep learning. Cell子刊Chem 2022; 8 (12), 3275-3287.(IF=25.8)
JC Xie, Y Wang, J Rao, S Zheng, Yuedong*. Self-supervised Contrastive Molecular Representation Learning with Chemical Synthesis Knowledge Graph. J Chem Inf Model 2024.
JC Xie, J Rao, JJ Xie, H Zhao; Yuedong Yang. Predicting Disease-gene Associations through Self-supervised Mutual Infomax Graph Convolution Network.
Comput Biol Med 2024;170:108048.
J Rao, J Xie, Q Yuan, D Liu, Z Wang, Y Lu*, S Zheng*, Yuedong Yang*. A Variational Expectation-Maximization Framework for Balanced Multi-scale Learning of Protein and Drug Interactions. Nature Comm 2024;15:4476.
S Zheng, J Rao, J Zhang, L Zhou, J Xie, E Cohen, W Lu, C Li, Y Yang. Cross-modal Graph Contrastive Learning with Cellular Images. Advanced Science 2024; doi: 10.1002/advs.202404845.
Q Yuan, J Xie, J Xie, H Zhao, Y Yang. Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusion. Briefings in Bioinformatics 2023; 24 (3), bbad117.
J Rao, S Zheng, Y Song, J Chen, C Li, J Xie, H Yang, H Chen, Y Yang. MolRep: A deep representation learning library for molecular property prediction. bioRxiv, 2021.01. 13.426489.